VEXOR
VEXOR prioritizes functional genetic variants in fine-mapping analyses by integrating GWAS association results with genomic annotations, reference tools, and experimental data.
Key Features:
- Integrative annotation consolidation: Consolidates multiple annotation tools and reference datasets to annotate genetic variants by genomic location and predicted functionality.
- Association-to-reference linking: Links GWAS association results with reference tools and experimental datasets to contextualize variant signals within fine-mapping regions.
- Predictive functional prioritization: Prioritizes candidate variants by predicting potential functional implications relevant to phenotypic traits and disease susceptibility.
Scientific Applications:
- Post-GWAS fine-mapping: Supports fine-mapping analyses to identify and rank candidate causal variants within GWAS-associated loci.
- Functional interpretation of variants: Facilitates interpretation of variant effects to generate hypotheses about genetic contributions to diseases and traits.
Methodology:
Combines multiple reference tools and datasets by linking GWAS association results with genomic annotations and experimental data to enable variant annotation and prioritization.
Topics
Details
- Tool Type:
- web application
- Operating Systems:
- Linux, Windows, Mac
- Added:
- 6/4/2018
- Last Updated:
- 11/25/2024
Operations
Publications
Lemaçon A, Joly Beauparlant C, Soucy P, Allen J, Easton D, Kraft P, Simard J, Droit A. VEXOR: an integrative environment for prioritization of functional variants in fine-mapping analysis. Bioinformatics. 2017;33(9):1389-1391. doi:10.1093/bioinformatics/btw826. PMID:28453673. PMCID:PMC5860431.