Vienna LiverTox Workspace

Vienna LiverTox Workspace predicts interaction profiles of small molecules with liver transporters to evaluate inhibition and transport activities relevant to pharmacokinetics, bile flow physiology, drug-drug interactions, and drug-induced liver injury.


Key Features:

  • Machine Learning Models: A set of machine learning classification models trained on comprehensive analyses of publicly available data predicts liver transporter interactions.
  • Regulatory-Relevant Transporters: Models cover liver transporters recognized as significant by the FDA, EMA, and the Japanese regulatory agency.
  • Dual Activity Prediction: Models predict both inhibition and transport activities of small molecules.
  • Validation and Predictive Performance: Models were validated using cross-validation techniques and external test sets, achieving balanced accuracies ranging from 0.64 to 0.88.

Scientific Applications:

  • Drug Development: Supports early-stage compound prioritization by predicting transporter-mediated effects on pharmacokinetics and efficacy.
  • Toxicology Assessment: Informs evaluation of drug-induced liver injury risk by assessing transporter inhibition and transport profiles.

Methodology:

Models were developed from comprehensive analysis of publicly available data using machine learning classification and validated with cross-validation and external test sets reporting balanced accuracies of 0.64–0.88.

Topics

Details

Added:
1/18/2021
Last Updated:
3/12/2021

Operations

Publications

Montanari F, Knasmüller B, Kohlbacher S, Hillisch C, Baierová C, Grandits M, Ecker GF. Vienna LiverTox Workspace—A Set of Machine Learning Models for Prediction of Interactions Profiles of Small Molecules With Transporters Relevant for Regulatory Agencies. Frontiers in Chemistry. 2020;7. doi:10.3389/fchem.2019.00899. PMID:31998690. PMCID:PMC6966498.

PMID: 31998690
PMCID: PMC6966498
Funding: - Austrian Science Fund: F03502 - Innovative Medicines Initiative: eTOX 115002