ViralZone

ViralZone provides curated fact sheets and integrated genomic and proteomic sequence data to support interpretation of viral gene functions, host range, replication cycles, and virion structures.


Key Features:

  • Comprehensive Fact Sheets: Detailed entries for virus families and genera that integrate textbook knowledge with genomic and proteomic sequences.
  • Access to Sequence Data: Provision of genomic and proteomic sequences for exploration of viral genetic makeup and comparative analyses.
  • Reference Strains (RefStrain): A curated set of annotated Reference Strains (RefStrain) serving as standards to benchmark viral sequence analyses.
  • Virion Imagery: A collection of high-quality virion images illustrating structural features of viruses.

Scientific Applications:

  • Functional Genomics: Correlating genomic data with host range and replication mechanisms to elucidate viral gene functions.
  • Proteomic Studies: Analysis of viral protein sequences to investigate protein function and interactions.
  • Epidemiological Research: Comparative sequence and structural data to support studies of virus evolution and spread.

Methodology:

Systematic curation combining textbook knowledge with empirical genomic and proteomic sequences and curated RefStrain standards, and inclusion of high-quality virion imagery.

Topics

Collections

Details

Maturity:
Mature
Tool Type:
web application
Operating Systems:
Linux, Windows, Mac
Added:
1/21/2015
Last Updated:
3/26/2020

Operations

Publications

Hulo C, de Castro E, Masson P, Bougueleret L, Bairoch A, Xenarios I, Le Mercier P. ViralZone: a knowledge resource to understand virus diversity. Nucleic Acids Research. 2010;39(suppl_1):D576-D582. doi:10.1093/nar/gkq901. PMID:20947564. PMCID:PMC3013774.