VisionTool

VisionTool performs semantic feature extraction from video using pre-trained deep neural networks and transfer learning to detect features for markerless pose estimation, motion analysis, face recognition, and biological cell tracking.


Key Features:

  • Implemented in Python: Provided as a Python toolbox for computational workflows.
  • Semantic feature extraction: Extracts semantic features from video data for downstream analysis.
  • Accurate feature detectors: Provides trainable feature detectors tailored to specific tasks to achieve high accuracy.
  • Markerless pose estimation: Supports detection of joint positions without physical markers.
  • Motion analysis: Enables extraction of motion-related features from video sequences.
  • Face recognition: Supports semantic feature detection for face recognition tasks.
  • Biological cell tracking: Supports tracking of biological cells in video data.
  • Pre-trained deep neural networks: Utilizes an extensive array of pre-trained deep neural network models.
  • Transfer learning: Applies transfer learning to adapt pre-trained models to new domains with limited annotated data.
  • Video annotation and joint position detection: Enables annotation of videos and detection of joint positions for pose-related analyses.

Scientific Applications:

  • Biomechanics: Markerless pose estimation and motion analysis for biomechanical studies.
  • Computational biology: Biological cell tracking in microscopy and video-based experiments.
  • Computer vision: Face recognition and general semantic feature detection in video datasets.
  • Pose estimation and feature detection: General use for pose estimation and semantic feature detection in video-based research.

Methodology:

Applies deep neural networks with pre-trained models and transfer learning to adapt models to new domains and enable high-accuracy semantic feature detection from video with limited training data.

Topics

Details

License:
GPL-3.0
Cost:
Free of charge
Tool Type:
command-line tool
Operating Systems:
Mac, Linux, Windows
Programming Languages:
Python
Added:
9/27/2022
Last Updated:
9/27/2022

Operations

Publications

Pastore VP, Moro M, Odone F. A semi-automatic toolbox for markerless effective semantic feature extraction. Scientific Reports. 2022;12(1). doi:10.1038/s41598-022-16014-8. PMID:35831385. PMCID:PMC9279291.