WebLab

WebLab provides an integrative knowledge-sharing platform that stores and shares biological input data and analysis results, integrates over 260 bioinformatic tools into customizable workflows, supports fetching public datasets from remote databases, and enables full-text literature search and citation export for collaborative biological research.


Key Features:

  • Data Management: Stores input data and analysis results and supports uploading local datasets and fetching public data from remote databases.
  • Bioinformatics Tools Integration: Integrates over 260 bioinformatic tools for a wide range of analyses.
  • Customized Workflows: Organizes integrated tools into user-defined workflows to automate complex analysis tasks.
  • Literature Support: Searches against full-text documents of uploaded literature and exports citations to EndNote and BibTeX.
  • Collaboration and Sharing: Shares input data, analysis results, literature, and customized workflows with specified colleagues or groups using privilege settings for controlled access.

Scientific Applications:

  • Collaborative research: Enables sharing of data, results, literature, and workflows among researchers for joint projects.
  • Interdisciplinary analyses: Integrates diverse datasets and bioinformatic tools to support complex, cross-disciplinary biological investigations.
  • Workflow-driven data analysis: Automates multi-step analyses through customizable workflows to conduct comprehensive data processing and interpretation.

Methodology:

Fetching public data from remote databases, uploading local datasets, integrating over 260 bioinformatic tools, organizing tools into customized workflows, searching full-text uploaded literature, exporting citations to EndNote and BibTeX, and sharing data/results/literature/workflows with specified colleagues or groups using privilege settings.

Topics

Details

Tool Type:
web application
Operating Systems:
Linux, Windows, Mac
Programming Languages:
Java
Added:
3/25/2017
Last Updated:
11/25/2024

Operations

Publications

Liu X, Wu J, Wang J, Liu X, Zhao S, Li Z, Kong L, Gu X, Luo J, Gao G. WebLab: a data-centric, knowledge-sharing bioinformatic platform. Nucleic Acids Research. 2009;37(suppl_2):W33-W39. doi:10.1093/nar/gkp428. PMID:19465388. PMCID:PMC2703900.