WESA
WESA predicts residue solvent accessibility in protein sequences, classifying residues as buried or exposed to support structural and functional analyses including hydrophobic core identification.
Key Features:
- Meta-predictor Approach: Employs a weighted ensemble/meta-predictor by averaging five distinct methods to classify residues into two states (buried or exposed).
- Hydrophobic Core Identification: Identifies residues that form the hydrophobic core by predicting buried residues relevant to protein stability.
- Predictive Accuracy: Reports an expected accuracy of 80% for two-state solvent accessibility prediction.
Scientific Applications:
- Deleterious Mutation Prediction: Aids identification of potential sites of deleterious mutations by flagging buried residues that are often mutation-sensitive.
- Structure Prediction: Provides solvent accessibility information that can be used to inform and improve protein structure prediction models.
Methodology:
Refines a suite of five prediction methods over an extensive dataset to produce a weighted ensemble average for two-state (buried/exposed) residue classification, with validation reported on six proteins with known mutation sites.
Topics
Details
- Tool Type:
- command-line tool
- Operating Systems:
- Linux
- Added:
- 12/18/2017
- Last Updated:
- 11/25/2024
Operations
Publications
Chen H. Prediction of solvent accessibility and sites of deleterious mutations from protein sequence. Nucleic Acids Research. 2005;33(10):3193-3199. doi:10.1093/nar/gki633. PMID:15937195. PMCID:PMC1142490.