WhichCyp

WhichCyp predicts which human cytochrome P450 (P450) isoforms are inhibited by a given molecule to assess potential impacts on drug metabolism and xenobiotic detoxification.


Key Features:

  • Predictive Capability: Predicts inhibition potential across five major human P450 isoforms using a classification model.
  • Target Isoforms: Reports inhibition for CYP1A2, CYP2C9, CYP2C19, CYP2D6, and CYP3A4.
  • Algorithm: Implements support vector machines (SVMs) as the classification algorithm.
  • Training Data: Models are constructed from high-throughput experimental data.
  • Molecular Signatures: Utilizes molecular signatures derived from the dataset to inform predictions.

Scientific Applications:

  • Drug Development: Predicting P450 inhibition supports assessment of drug-drug interaction risk and dosing considerations.
  • Toxicology Studies: Identifying potential P450 inhibitors aids evaluation of metabolic stability and safety profiles of compounds.
  • Personalized Medicine: Inhibition profiles can inform tailoring treatments based on individual metabolic enzyme interactions.

Methodology:

Support vector machines (SVMs) trained on molecular signatures derived from high-throughput experimental data are used to classify inhibition of the five human P450 isoforms.

Topics

Details

Tool Type:
web application
Operating Systems:
Linux, Windows, Mac
Programming Languages:
Java
Added:
8/3/2017
Last Updated:
11/25/2024

Operations

Publications

Rostkowski M, Spjuth O, Rydberg P. WhichCyp: prediction of cytochromes P450 inhibition. Bioinformatics. 2013;29(16):2051-2052. doi:10.1093/bioinformatics/btt325. PMID:23740742.

Documentation

Links