WhichCyp
WhichCyp predicts which human cytochrome P450 (P450) isoforms are inhibited by a given molecule to assess potential impacts on drug metabolism and xenobiotic detoxification.
Key Features:
- Predictive Capability: Predicts inhibition potential across five major human P450 isoforms using a classification model.
- Target Isoforms: Reports inhibition for CYP1A2, CYP2C9, CYP2C19, CYP2D6, and CYP3A4.
- Algorithm: Implements support vector machines (SVMs) as the classification algorithm.
- Training Data: Models are constructed from high-throughput experimental data.
- Molecular Signatures: Utilizes molecular signatures derived from the dataset to inform predictions.
Scientific Applications:
- Drug Development: Predicting P450 inhibition supports assessment of drug-drug interaction risk and dosing considerations.
- Toxicology Studies: Identifying potential P450 inhibitors aids evaluation of metabolic stability and safety profiles of compounds.
- Personalized Medicine: Inhibition profiles can inform tailoring treatments based on individual metabolic enzyme interactions.
Methodology:
Support vector machines (SVMs) trained on molecular signatures derived from high-throughput experimental data are used to classify inhibition of the five human P450 isoforms.
Topics
Details
- Tool Type:
- web application
- Operating Systems:
- Linux, Windows, Mac
- Programming Languages:
- Java
- Added:
- 8/3/2017
- Last Updated:
- 11/25/2024
Operations
Publications
Rostkowski M, Spjuth O, Rydberg P. WhichCyp: prediction of cytochromes P450 inhibition. Bioinformatics. 2013;29(16):2051-2052. doi:10.1093/bioinformatics/btt325. PMID:23740742.
PMID: 23740742