Whiteboard
Whiteboard provides a C++ class library for visualization and integrated computational analysis of large and complex bioinformatics datasets.
Key Features:
- C++ class library: Implemented as a C++ class library for programmatic integration into bioinformatics workflows.
- Integrated visualization and computation: Couples visualization directly with computation to enable real-time analysis and graphical representation of complex datasets.
- Versatile graphing capabilities: Supports basic drawing of simple objects, color manipulation, and creation of compound graphs for detailed data representation.
- High-performance rendering and scalability: Provides efficient, scalable rendering of graphical elements suitable for large datasets and high-performance visualization tasks.
- Flexible data-type and format support: Framework can be adapted to various data types and formats encountered in biological data analyses.
Scientific Applications:
- Genomic data visualization: Visualizes large-scale genomic datasets to reveal structure and patterns within sequence and genome-wide data.
- Proteomic data visualization: Represents complex proteomic datasets to aid interpretation of protein-level relationships and patterns.
- Exploration of large biological datasets: Enables graphical exploration of complex relationships in large-scale biological data to support pattern discovery.
Methodology:
Implemented as a C++ class library with high-performance rendering to enable efficient, scalable visualization adaptable to various data types and formats.
Topics
Details
- Tool Type:
- desktop application
- Operating Systems:
- Linux, Windows, Mac
- Programming Languages:
- C++
- Added:
- 8/3/2017
- Last Updated:
- 11/25/2024
Operations
Publications
Sundström G, Zamani N, Grabherr MG, Mauceli E. <i>Whiteboard</i>: a framework for the programmatic visualization of complex biological analyses. Bioinformatics. 2015;31(12):2054-2055. doi:10.1093/bioinformatics/btv078. PMID:25661541.
PMID: 25661541