WIAD
WIAD analyzes and archives high-resolution wood sample images to extract quantitative and visual features (e.g., growth increments, density fluctuations, early- and latewood widths, fire scars, color, and texture) for dendrochronological and ecological research.
Key Features:
- Digitization support: Supports digitization of wood samples including increment cores, thin sections, and x-ray films for downstream analysis.
- Visual analysis: Extracts and measures growth increments, density fluctuations, early- and latewood widths, fire scars, and quantifies color and texture from images.
- Data processing and archiving: Processes and archives original images and derived data, enabling traceability of analyses and datasets.
- Transparency and reproducibility: Links image-derived measurements with archived data and metadata to promote reproducible research outputs.
Scientific Applications:
- Dendrochronology: Supports ring-width and multi-parameter analyses for tree-ring dating and chronology development.
- Paleoclimatology: Enables reconstruction of past climatic conditions from ring properties and density variations.
- Ecology and environmental change: Facilitates study of environmental impacts on tree growth patterns using visual and quantitative wood features.
- Cross-disciplinary research: Provides image-derived datasets usable in archaeology, geology, climatology, and chronology studies.
Methodology:
Capture high-resolution images of wood samples; annotate specific features within images; measure parameters and derive metrics from images; and store images, measurements, and metadata in a structured archive.
Topics
Details
- Programming Languages:
- R
- Added:
- 1/18/2021
- Last Updated:
- 3/14/2021
Operations
Publications
Rademacher T, Seyednasrollah B, Basler DJ, Cheng J, Mandra T, Miller E, Lin Z, Orwig DA, Pederson N, Pfister H, Wei D, Yao L, Richardson AD. The Wood Image Analysis and Dataset (WIAD): open-access visual analysis tools to advance the ecological data revolution. Unknown Journal. 2020. doi:10.1101/2020.12.16.423133.