WilsonGen
WilsonGen provides a curated, clinically annotated catalog of ATP7B gene variants associated with Wilson's disease to support diagnostic interpretation and research.
Key Features:
- Curated variant collection: Manual curation of genetic variant data from literature and various data resources.
- ACMG & AMP classification: Systematic annotation and pathogenicity classification using American College of Medical Genetics (ACMG) & Association for Molecular Pathology (AMP) guidelines.
- Variant counts: Contains 3,662 genetic variants associated with Wilson's disease, including 1,458 unique entries and 656 variants classified as pathogenic or likely pathogenic.
- ATP7B protein mapping: Includes detailed mappings of pathogenic variants to the ATP7B protein derived from literature and other databases.
- Geographical distribution: Provides annotations of geographical origin and distribution of pathogenic variants across ethnic and geographical populations.
Scientific Applications:
- Clinical diagnosis and interpretation: Supports clinicians and geneticists in diagnostic interpretation and evidence-based clinical decision-making for Wilson's disease.
- Genetic research: Facilitates research into the genetic underpinnings and variant pathogenicity of ATP7B in Wilson's disease.
- Population and epidemiological analysis: Enables analysis of geographic and ethnic distribution and prevalence of ATP7B pathogenic variants.
Methodology:
Manual curation of genetic variant data from literature and various data resources; systematic annotation and classification of variants using ACMG & AMP guidelines; mapping of pathogenic variants to the ATP7B protein and recording of geographical origin and distribution from literature and databases.
Topics
Details
- Added:
- 1/18/2021
- Last Updated:
- 3/14/2021
Operations
Publications
Kumar M, Gaharwar U, Paul S, Poojary M, Pandhare K, Scaria V, BK B. WilsonGen a comprehensive clinically annotated genomic variant resource for Wilson’s Disease. Scientific Reports. 2020;10(1). doi:10.1038/s41598-020-66099-2. PMID:32493955. PMCID:PMC7270127.