XCMS Online

A systems biology tool for analyzing metabolomic data. It automatically superimposes raw metabolomic data onto metabolic pathways and integrates it with transcriptomic and proteomic data.
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Topics

Systems biologyMolecular interactions, pathways and networksMetabolomics

Details

Maturity:
Mature
Cost:
Free of charge
Tool Type:
web application
Operating Systems:
Linux, Windows, Mac
Added:
6/5/2018
Last Updated:
11/25/2024

Operations

Data Inputs & Outputs

Metabolic network modelling

Outputs

    Publications

    Huan T, Forsberg EM, Rinehart D, Johnson CH, Ivanisevic J, Benton HP, Fang M, Aisporna A, Hilmers B, Poole FL, Thorgersen MP, Adams MWW, Krantz G, Fields MW, Robbins PD, Niedernhofer LJ, Ideker T, Majumder EL, Wall JD, Rattray NJW, Goodacre R, Lairson LL, Siuzdak G. Systems biology guided by XCMS Online metabolomics. Nature Methods. 2017;14(5):461-462. doi:10.1038/nmeth.4260. PMID:28448069. PMCID:PMC5933448.

    PMID: 28448069
    PMCID: PMC5933448
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