ZENBU-Reports

ZENBU-Reports visualizes and disseminates genome-scale genomic datasets by creating interactive scientific web portals for publication and collaborative research.


Key Features:

  • Data Storage and Security: Securely stores uploaded genomic datasets and manages access control for collaborative sharing.
  • Interactive Visualization Elements: Generates interactive scientific visualizations suitable for supplementary websites, publications, and presentations.
  • Interactive Portal Generation: Constructs interactive scientific web portals to disseminate genome-wide datasets and associated visualizations.
  • Lifecycle Support: Maintains dataset accessibility and interpretability post-publication across the research lifecycle.
  • Scalability: Handles massive genome-wide and genome-scale datasets produced by consortia and large projects.

Scientific Applications:

  • Publication Supplementation: Hosting interactive supplementary websites and figures accompanying scientific publications.
  • Consortia and Collaboration: Sharing and presenting genome-wide datasets from international consortia, intra-organizational collaborations, and individual laboratories.
  • Data Exploration and Presentation: Enabling interactive exploration of large-scale genomic data in presentations and research projects.

Methodology:

Users upload genomic datasets into a secure storage environment where the platform stores and manages the data, constructs interactive visualizations, and generates interactive scientific web portals.

Topics

Details

License:
CC-BY-4.0
Cost:
Free of charge
Tool Type:
web application
Operating Systems:
Mac, Linux, Windows
Programming Languages:
JavaScript, C++, Perl
Added:
1/30/2024
Last Updated:
11/24/2024

Operations

Publications

Severin J, Agrawal S, Ramilowski JA, Deviatiiarov R, Shin JW, Carninci P, de Hoon M. ZENBU-Reports: a graphical web-portal builder for interactive visualization and dissemination of genome-scale data. NAR Genomics and Bioinformatics. 2023;5(3). doi:10.1093/nargab/lqad075. PMID:37608799. PMCID:PMC10440783.

Links