IMGT DomainDisplay
IMGT DomainDisplay displays amino acid sequences of variable (V), constant (C), and groove (G) domains from immunoglobulins (IGs or antibodies), T cell receptors (TRs), major histocompatibility (MH) proteins and related superfamilies to support immunogenetics and immunoinformatics analyses.
Key Features:
- Domain Display: Displays amino acid sequences of V, C and G domains for IGs, TRs, MH proteins and related superfamilies.
- IMGT-ONTOLOGY framework: Implements IMGT-ONTOLOGY axioms and concepts including standardized keywords, labels, nomenclature, unique numbering and the IMGT Colliers de Perles (numerotation) method.
- Integration with IMGT resources: Integrates with seven IMGT databases, 17 online tools and the broader IMGT resource corpus to support analysis of genomic and expressed IG and TR repertoires.
- High-throughput data analysis: Accommodates next-generation sequencing (NGS) data for large-scale immunogenetic datasets.
- Therapeutic antibody interface: Provides interfaces with IMGT/mAb-DB to support analysis related to therapeutic antibodies and fusion proteins.
Scientific Applications:
- Basic Research: Characterizing the genetic and functional diversity of immune receptors including IG and TR repertoires.
- Veterinary and Medical Research: Comparative and disease-related studies across veterinary and medical immunology.
- Clinical Applications: Mutation analysis in conditions such as leukemia and lymphoma to inform disease mechanisms.
- Antibody Engineering and Humanization: Support for engineering and humanization of therapeutic antibodies and fusion proteins for immunological applications (FPIA).
- Therapeutic Antibodies Research: Supporting research and development of therapeutic antibodies via the IMGT/mAb-DB interface.
Methodology:
Displays amino acid domain sequences and applies IMGT-ONTOLOGY concepts (standardized keywords, labels, nomenclature, unique numbering, IMGT Colliers de Perles); integrates data from IMGT databases and tools and accommodates next-generation sequencing (NGS) data.
Topics
Details
- Maturity:
- Mature
- Cost:
- Free of charge (with restrictions)
- Tool Type:
- web application
- Operating Systems:
- Linux, Windows, Mac
- Programming Languages:
- Perl
- Added:
- 12/20/2019
- Last Updated:
- 11/25/2024
Operations
Data Inputs & Outputs
Query and retrieval
Publications
Lefranc M, Giudicelli V, Duroux P, Jabado-Michaloud J, Folch G, Aouinti S, Carillon E, Duvergey H, Houles A, Paysan-Lafosse T, Hadi-Saljoqi S, Sasorith S, Lefranc G, Kossida S. IMGT®, the international ImMunoGeneTics information system® 25 years on. Nucleic Acids Research. 2014;43(D1):D413-D422. doi:10.1093/nar/gku1056. PMID:25378316. PMCID:PMC4383898.