Interactive Tree Of Life

iTOL, Interactive Tree Of Life, is a web-based tool to display and annotate phylogenetic trees. The free access allows users to create unlimited workspaces and projects, upload trees, use annotation functions that cannot be saved but can be exported, and use the batch upload function.

Topic

Phylogenetics;Metagenomics;Genomics

Detail

  • Operation: Phylogenetic tree visualisation;Phylogenetic tree analysis

  • Software interface: Web user interface

  • Language: Javascript

  • License: Other

  • Cost: Free access with limitations

  • Version name: 5

  • Credit: German Federal Ministry of Education and Research, European Molecular Biology Laboratory (EMBL).

  • Input: -

  • Output: -

  • Contact: zeller@embl.de, Ivica Letunic letunic@biobyte.de

  • Collection: -

  • Maturity: Mature

Publications

  • Interactive Tree Of Life (iTOL): an online tool for phylogenetic tree display and annotation.
  • Letunic I, Bork P. Interactive Tree Of Life (iTOL): an online tool for phylogenetic tree display and annotation. Bioinformatics. 2007 Jan 1;23(1):127-8. doi: 10.1093/bioinformatics/btl529. Epub 2006 Oct 18. PMID: 17050570.
  • https://doi.org/10.1093/bioinformatics/btl529
  • PMID: 17050570
  • PMC: -
  • Interactive Tree Of Life (iTOL) v5: an online tool for phylogenetic tree display and annotation.
  • Letunic I, Bork P (2021). Interactive Tree Of Life (iTOL) v5: an online tool for phylogenetic tree display and annotation. Nucleic Acids Res 49(W1): W293-W296.
  • https://doi.org/10.1093/nar/gkab301
  • PMID: 33885785
  • PMC: PMC8265157
  • Interactive Tree Of Life v2: online annotation and display of phylogenetic trees made easy.
  • Letunic I, Bork P. Interactive Tree Of Life v2: online annotation and display of phylogenetic trees made easy. Nucleic Acids Res. 2011 Jul;39(Web Server issue):W475-8. doi: 10.1093/nar/gkr201. Epub 2011 Apr 5. PMID: 21470960; PMCID: PMC3125724.
  • https://doi.org/10.1093/nar/gkr201
  • PMID: 21470960
  • PMC: PMC3125724
  • Interactive tree of life (iTOL) v3: an online tool for the display and annotation of phylogenetic and other trees.
  • Letunic I, Bork P. Interactive tree of life (iTOL) v3: an online tool for the display and annotation of phylogenetic and other trees. Nucleic Acids Res. 2016 Jul 8;44(W1):W242-5. doi: 10.1093/nar/gkw290. Epub 2016 Apr 19. PMID: 27095192; PMCID: PMC4987883.
  • https://doi.org/10.1093/nar/gkw290
  • PMID: 27095192
  • PMC: PMC4987883
  • Interactive Tree Of Life (iTOL) v4: recent updates and new developments.
  • Letunic I, Bork P. Interactive Tree Of Life (iTOL) v4: recent updates and new developments. Nucleic Acids Res. 2019 Jul 2;47(W1):W256-W259. doi: 10.1093/nar/gkz239. PMID: 30931475; PMCID: PMC6602468.
  • https://doi.org/10.1093/nar/gkz239
  • PMID: 30931475
  • PMC: PMC6602468

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