LOTUS

LOTUS consolidates and shares referenced structure-organism pairs via an open platform to enable knowledge management, analysis, and interpretation in natural products research.


Key Features:

  • Harmonized Data Curation: LOTUS harmonizes, curates, and validates over 750,000 referenced structure-organism pairs establishing relationships between molecular structures and the living organisms from which they were identified.
  • Open Data Hosting: LOTUS data is hosted on Wikidata and regularly mirrored on https://lotus.naturalproducts.net, broadening data access and interoperability.
  • Knowledge Graph Integration: LOTUS data is embedded into the Wikidata knowledge graph to facilitate new biological and chemical insights.
  • Community Curation Support: Data sharing within the Wikidata framework enables community curation and evolving publication models.

Scientific Applications:

  • Natural Products Research: LOTUS enables a more complete understanding of organisms and their chemistry through documented structure-organism pairs.
  • Data Integration and Interoperability: LOTUS addresses challenges of data access within natural products discipline and integration between related fields by consolidating referenced structure-organism pairs on an open platform.
  • Biological and Chemical Insight Discovery: Embedding LOTUS data into the Wikidata knowledge graph facilitates new biological and chemical insights through interconnected knowledge exploration.

Methodology:

LOTUS completes harmonization, curation, validation and open dissemination of referenced structure-organism pairs within the Wikidata framework.

Topics

Details

License:
MIT
Tool Type:
web application
Programming Languages:
JavaScript
Added:
10/4/2021
Last Updated:
12/6/2022

Operations

Publications

Documentation

Downloads

Links

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