VSM (Visual Syntax Method)
VSM (Visual Syntax Method) encodes and represents complex scientific knowledge in a semantically precise, machine-readable format to support computational curation and knowledge representation.
Key Features:
- Semantic precision: Encodes scientific assertions with semantic precision to make them computationally accessible.
- General-purpose knowledge model: Uses a universal knowledge model that accommodates diverse information types and rich contextual details from scientific literature.
- High-level encoding language: Provides a high-level language for encoding ideas into structured, machine-readable representations.
- Knowledge curation: Supports precise curation and representation of literature-derived knowledge for downstream computational use.
Scientific Applications:
- Literature curation in life sciences: Enables manual curation and semantic capture of literature-derived knowledge in life sciences.
- Data integration and analysis: Translates diverse findings into computable formats for integration and computational analysis.
- Hypothesis generation and collaboration: Facilitates hypothesis generation and collaborative sharing of semantically encoded findings.
Methodology:
Creation of a high-level encoding language that converts complex information into structured, machine-readable representations.
Topics
Collections
Details
- License:
- AGPL-3.0
- Maturity:
- Mature
- Programming Languages:
- JavaScript
- Added:
- 1/18/2021
- Last Updated:
- 4/13/2021
Operations
Data Inputs & Outputs
Publications
Vercruysse S, Kuiper M. Intuitive Representation of Computable Knowledge. Unknown Journal. 2020. doi:10.20944/preprints202007.0486.v2.
Vercruysse S, Zobolas J, Touré V, Andersen MK, Kuiper M. VSM-box: General-purpose Interface for Biocuration and Knowledge Representation. Unknown Journal. 2020. doi:10.20944/preprints202007.0557.v1.
Vercruysse S. VSM-box: the general-purpose curation interface as an open-source web-component. 2020Nov10; Available from: https://zenodo.org/record/4265420