6mAPred-FO

'6mAPred-FO' is a tool for swift and accurate prediction of DNA N6-methyladenine (6mA) sites on a genomic scale. Using sequence information exclusively, the tool combines sequence-order details with positional specificity for feature encoding. An analysis of variance-based feature optimization protocol improves feature representation.

Topic

Machine learning;Methylated DNA immunoprecipitation;DNA;Epigenetics;Plant biology

Detail

  • Operation: Network analysis;Feature selection;Phasing

  • Software interface: Web user interface

  • Language: -

  • License: -

  • Cost: Free

  • Version name: -

  • Credit: National Natural Science Foundation of China

  • Input: -

  • Output: -

  • Contact: Guobao Xiao gbx@mju.edu.cn, Leyi Wei weileyi@tju.edu.cn

  • Collection: -

  • Maturity: -

Publications

  • A Bioinformatics Tool for the Prediction of DNA N6-Methyladenine Modifications Based on Feature Fusion and Optimization Protocol.
  • Cai J, et al. A Bioinformatics Tool for the Prediction of DNA N6-Methyladenine Modifications Based on Feature Fusion and Optimization Protocol. A Bioinformatics Tool for the Prediction of DNA N6-Methyladenine Modifications Based on Feature Fusion and Optimization Protocol. 2020; 8:502. doi: 10.3389/fbioe.2020.00502
  • https://doi.org/10.3389/FBIOE.2020.00502
  • PMID: 32582654
  • PMC: PMC7287168

Download and documentation

    Currently not available or not maintained.

< Back to DB search