AVPdb

AVPdb (Anti Viral Peptide Database) is a web-based antiviral database containing experimentally verified antiviral proteins that target over 60 viruses, such as Influenza, HCV, HSV, RSV, HBV, DENV, HIV, and SARS. The database currently contains 2,683 peptides. You can find information on peptide sequence, length, source, virus targeted, virus family, cell-line, efficacy, target step/protein, the assay used, PubMed reference, physicochemical properties, and predicted structure.

Topic

Small molecules;Proteomics;Protein sites, features and motifs

Detail

  • Operation: Peptide database search;Protein signal peptide detection;Quantification

  • Software interface: Web user inteface,Database portal

  • Language: PHP;SQL

  • License: -

  • Cost: Free

  • Version name: -

  • Credit: The Council of Scientific and Industrial Research, India,the Department of Biotechnology, Government of India, CSIR-Institute of Microbial Technology, Chandigarh.

  • Input: -

  • Output: -

  • Contact: manojk@imtech.res.in

  • Collection: -

  • Maturity: Stable

Publications

  • AVPdb: a database of experimentally validated antiviral peptides targeting medically important viruses.
  • Qureshi A, Thakur N, Tandon H, Kumar M. AVPdb: a database of experimentally validated antiviral peptides targeting medically important viruses. Nucleic Acids Res. 2014 Jan;42(Database issue):D1147-53. doi: 10.1093/nar/gkt1191. Epub 2013 Nov 26. PMID: 24285301; PMCID: PMC3964995.
  • https://doi.org/10.1093/nar/gkt1191
  • PMID: 24285301
  • PMC: PMC3964995

Download and documentation

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