BJASS
BJASS (Buckley-James Assisted Sure Screening) is a software tool implemented in Matlab for variable screening in high-dimensional survival analysis. It is designed to reduce the dimensionality of datasets with many covariates before applying more refined methods for model selection and statistical analysis.
The key features of BJASS are:
1. It is based on a sparsity-restricted semiparametric accelerated failure time model, making it suitable for right-censored time-to-event data.
2. The screening procedure consists of an initial screening step using a sparsity-restricted least-squares estimate based on a synthetic time variable, followed by one or more refinement screening steps using a sparsity-restricted least-squares estimate with the Buckley-James imputed event times.
Topic
Detail
Operation: Enrichment analysis;Imputation;Regression analysis
Software interface: Command-line user interface
Language: MATLAB
License: Not stated
Cost: Free of charge
Version name: -
Credit: NNSF.
Input: -
Output: -
Contact: Gang Li vli@ucla.edu
Collection: -
Maturity: -
Publications
- A new joint screening method for right-censored time-to-event data with ultra-high dimensional covariates.
- Liu Y, et al. A new joint screening method for right-censored time-to-event data with ultra-high dimensional covariates. A new joint screening method for right-censored time-to-event data with ultra-high dimensional covariates. 2020; 29:1499-1513. doi: 10.1177/0962280219864710
- https://doi.org/10.1177/0962280219864710
- PMID: 31359834
- PMC: PMC8285086
Download and documentation
Source: https://github.com/yiucla/BJASS
Documentation: https://github.com/yiucla/BJASS/blob/master/README.md
Home page: https://github.com/yiucla/BJASS
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