BioMAJ

The software tool BioMAJ provides an automated environment for managing large amounts of biological data from heterogeneous databanks. It is a JAVA application that enables the automation of the data update cycle process and the supervision of the locally mirrored data repository. BioMAJ provides workflows for commonly used bioinformatics databases and allows post-synchronization data treatment via a set of scripts.

Topic

Data management

Detail

  • Operation: Indexing;Conversion

  • Software interface: Command-line user interface;Web user interface

  • Language: Python

  • License: CECILL version 2

  • Cost: Free

  • Version name: -

  • Credit: RNG (Reseau National des Genopoles), the ReNaBi network, Région Bretagne, INRA, INRIA.

  • Input: -

  • Output: -

  • Contact: support@genouest.org

  • Collection: -

  • Maturity: -

Publications

  • BioMAJ: a flexible framework for databanks synchronization and processing.
  • Filangi O, et al. BioMAJ: a flexible framework for databanks synchronization and processing. BioMAJ: a flexible framework for databanks synchronization and processing. 2008; 24:1823-5. doi: 10.1093/bioinformatics/btn325
  • https://doi.org/10.1093/bioinformatics/btn325
  • PMID: 18593718
  • PMC: PMC3293366

Download and documentation

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