BioNSi

Biosci (Biological Network Simulator) is a tool for modeling and simulation biological networks. Biosci is Cytoscape App.

Topic

Molecular interactions, pathways and networks;Molecular modelling

Detail

  • Operation: Molecular dynamics;Pathway or network analysis;Network simulation;Pathway or network visualisation

  • Software interface: Library

  • Language: Java

  • License: CC-BY-4.0

  • Cost: Free

  • Version name: -

  • Credit: -

  • Input: -

  • Output: -

  • Contact: -

  • Collection: -

  • Maturity: -

Publications

  • BioNSi: A Discrete Biological Network Simulator Tool.
  • Rubinstein A, Bracha N, Rudner L, Zucker N, Sloin HE, Chor B. BioNSi: A Discrete Biological Network Simulator Tool. J Proteome Res. 2016 Aug 5;15(8):2871-80. doi: 10.1021/acs.jproteome.6b00278. Epub 2016 Jul 13. PMID: 27354160.
  • https://doi.org/10.1021/acs.jproteome.6b00278
  • PMID: 27354160
  • PMC: -
  • Simulation and visualization of multiple KEGG pathways using BioNSi.
  • Yeheskel A, et al. Simulation and visualization of multiple KEGG pathways using BioNSi. Simulation and visualization of multiple KEGG pathways using BioNSi. 2017; 6:2120. doi: 10.12688/f1000research.13254.2
  • https://doi.org/10.12688/f1000research.13254.2
  • PMID: 29946422
  • PMC: PMC6008849

Download and documentation

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