CASAS

Interactive survival analysis and visualization. Perform the following types of survival analysis: quantile, landmark and competing risks, in addition to standard survival analysis. >>> We present CASAS, a shiny R based tool for interactive survival analysis and visualization of results. The tool provides a web-based one stop shop to perform the following types of survival analysis: quantile, landmark and competing risks, in addition to standard survival analysis. The interface makes it easy to perform such survival analyses and obtain results using the interactive Kaplan-Meier and cumulative incidence plots. Univariate analysis can be performed on one or several user specified variable(s) simultaneously, the results of which are displayed in a single table that includes log rank p-values and hazard ratios along with their significance. For several quantile survival analyses from multiple cancer types, a single summary grid is constructed. The CASAS package has been implemented in R and is available via http://shinygispa.winship.emory.edu/CASAS/. The developmental repository is available at https://github.com/manalirupji/CASAS/. >>> CASAS: Cancer Survival Analysis Suite, a web based application.

Topic

Experimental design and studies

Detail

  • Operation: Visualisation

  • Software interface: Web application;Suite

  • Language: R

  • License: Suite

  • Cost: Free

  • Version name: v1.0.0

  • Credit: Biostatistics and Bioinformatics Shared Resource of Winship Cancer Institute of Emory University, NIH/NCI.

  • Input: -

  • Output: -

  • Contact: manali.rupji@emory.edu

  • Collection: -

  • Maturity: -

Publications

  • CASAS: Cancer Survival Analysis Suite, a web based application.
  • Rupji M, et al. CASAS: Cancer Survival Analysis Suite, a web based application. CASAS: Cancer Survival Analysis Suite, a web based application. 2017; 6:919. doi: 10.12688/f1000research.11830.2
  • https://doi.org/10.12688/f1000research.11830.2
  • PMID: 28928946
  • PMC: PMC5580407

Download and documentation


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