COMPASS
COMPASS is a simulator that can trace the evolution of any discrete state space over a period of time, according to any time-reversible model.
Topic
Simulation experiment;Sequencing;Population genetics
Detail
Operation: Modelling and simulation
Software interface: Library
Language: Python
License: -
Cost: Free
Version name: -
Credit: NSERC Discovery Grant, CIHR New Investigator Salary Award.
Input: -
Output: -
Contact: Wong Alex alex_wong@carleton.ca
Collection: -
Maturity: -
Publications
- COMPASS: the COMPletely Arbitrary Sequence Simulator.
- Low A, et al. COMPASS: the COMPletely Arbitrary Sequence Simulator. COMPASS: the COMPletely Arbitrary Sequence Simulator. 2017; 33:3101-3103. doi: 10.1093/bioinformatics/btx347
- https://doi.org/10.1093/bioinformatics/btx347
- PMID: 28582485
- PMC: PMC5870535
Download and documentation
Documentation: https://github.com/WongLabPrograms/COMPASS/blob/master/COMPASS_Manual.pdf
Home page: https://github.com/WongLabPrograms/COMPASS
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