CRISPR-GE

CRISPR-GE is a web-based set of tools for mutation analyses of CRISPR/Cas9/Cpf1-based genome editing.

Topic

Genomics

Detail

  • Operation: Sequence editing

  • Software interface: Web user interface

  • Language: Python

  • License: -

  • Cost: Free

  • Version name: -

  • Credit: Guangdong Province Public Interest Research and Capacity Building Special Fund, the Ministry of Agriculture of the People's Republic of China,the Postdoctoral Science Foundation of China.

  • Input: -

  • Output: -

  • Contact: skl-cusa@scau.edu.cn

  • Collection: -

  • Maturity: -

Publications

  • MMEJ-KO: a web tool for designing paired CRISPR guide RNAs for microhomology-mediated end joining fragment deletion
  • Kaushik A, et al. miRMOD: a tool for identification and analysis of 5' and 3' miRNA modifications in Next Generation Sequencing small RNA data. miRMOD: a tool for identification and analysis of 5' and 3' miRNA modifications in Next Generation Sequencing small RNA data. 2015; 3:e1332. doi: 10.7717/peerj.1332
  • https://doi.org/10.1007/s11427-020-1797-3
  • PMID: -
  • PMC: -
  • DSDecode: A Web-Based Tool for Decoding of Sequencing Chromatograms for Genotyping of Targeted Mutations
  • Liu W, Xie X, Ma X, Li J, Chen J, Liu YG. DSDecode: A Web-Based Tool for Decoding of Sequencing Chromatograms for Genotyping of Targeted Mutations. Mol Plant. 2015 Sep;8(9):1431-3. doi: 10.1016/j.molp.2015.05.009. Epub 2015 May 30. PMID: 26032088.
  • https://doi.org/10.1016/j.molp.2015.05.009
  • PMID: 26032088
  • PMC: -
  • CRISPR-GE: A Convenient Software Toolkit for CRISPR-Based Genome Editing.
  • Xie X, Ma X, Zhu Q, Zeng D, Li G, Liu YG. CRISPR-GE: A Convenient Software Toolkit for CRISPR-Based Genome Editing. Mol Plant. 2017 Sep 12;10(9):1246-1249. doi: 10.1016/j.molp.2017.06.004. Epub 2017 Jun 15. PMID: 28624544.
  • https://doi.org/10.1016/j.molp.2017.06.004
  • PMID: 28624544
  • PMC: -

Download and documentation


< Back to DB search