CRISPR-GE
CRISPR-GE is a web-based set of tools for mutation analyses of CRISPR/Cas9/Cpf1-based genome editing.
Topic
Genomics
Detail
Operation: Sequence editing
Software interface: Web user interface
Language: Python
License: -
Cost: Free
Version name: -
Credit: Guangdong Province Public Interest Research and Capacity Building Special Fund, the Ministry of Agriculture of the People's Republic of China,the Postdoctoral Science Foundation of China.
Input: -
Output: -
Contact: skl-cusa@scau.edu.cn
Collection: -
Maturity: -
Publications
- MMEJ-KO: a web tool for designing paired CRISPR guide RNAs for microhomology-mediated end joining fragment deletion
- Kaushik A, et al. miRMOD: a tool for identification and analysis of 5' and 3' miRNA modifications in Next Generation Sequencing small RNA data. miRMOD: a tool for identification and analysis of 5' and 3' miRNA modifications in Next Generation Sequencing small RNA data. 2015; 3:e1332. doi: 10.7717/peerj.1332
- https://doi.org/10.1007/s11427-020-1797-3
- PMID: -
- PMC: -
- DSDecode: A Web-Based Tool for Decoding of Sequencing Chromatograms for Genotyping of Targeted Mutations
- Liu W, Xie X, Ma X, Li J, Chen J, Liu YG. DSDecode: A Web-Based Tool for Decoding of Sequencing Chromatograms for Genotyping of Targeted Mutations. Mol Plant. 2015 Sep;8(9):1431-3. doi: 10.1016/j.molp.2015.05.009. Epub 2015 May 30. PMID: 26032088.
- https://doi.org/10.1016/j.molp.2015.05.009
- PMID: 26032088
- PMC: -
- CRISPR-GE: A Convenient Software Toolkit for CRISPR-Based Genome Editing.
- Xie X, Ma X, Zhu Q, Zeng D, Li G, Liu YG. CRISPR-GE: A Convenient Software Toolkit for CRISPR-Based Genome Editing. Mol Plant. 2017 Sep 12;10(9):1246-1249. doi: 10.1016/j.molp.2017.06.004. Epub 2017 Jun 15. PMID: 28624544.
- https://doi.org/10.1016/j.molp.2017.06.004
- PMID: 28624544
- PMC: -
Download and documentation
Documentation: http://skl.scau.edu.cn/help/
Home page: http://skl.scau.edu.cn/home/
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