ClassifyR

ClassifyR is a new generic framework implemented in R that provides a way to link custom classification functions with classification performance measures. The framework is designed in an object-oriented style with a focus on parallel processing, reproducibility, and extensibility. A comprehensive set of performance measures is available for post-processing, enabling rapid and reproducible benchmarking of alternative classifiers.

Topic

Sequence analysis

Detail

  • Operation: Sequence classification

  • Software interface: Command-line user interface;Library

  • Language: R

  • License: GNU General Public License, version 3

  • Cost: Free

  • Version name: 3.2.7

  • Credit: ARC Early Career Award, ARC Future Fellowship, Australian Postgraduate Award.

  • Input: -

  • Output: -

  • Contact: Dario Strbenac dario.strbenac@sydney.edu.au

  • Collection: -

  • Maturity: Mature

Publications

  • ClassifyR: an R package for performance assessment of classification with applications to transcriptomics.
  • Strbenac D, et al. ClassifyR: an R package for performance assessment of classification with applications to transcriptomics. ClassifyR: an R package for performance assessment of classification with applications to transcriptomics. 2015; 31:1851-3. doi: 10.1093/bioinformatics/btv066
  • https://doi.org/10.1093/bioinformatics/btv066
  • PMID: 25644269
  • PMC: -

Download and documentation

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