ConKit
ConKit is a Python interface that enables the easy transformation of data between formats and offers access to evaluations of sequence alignments and groups of contact predictions. It is open-source, modular, and expandable.
Topic
Proteins;Sequence analysis;Data visualisation
Detail
Operation: Protein contact map calculation
Software interface: Command-line user interface
Language: Python
License: BSD-3-Clause
Cost: Free
Version name: 0.13.3
Credit: The Biotechnology and Biological Sciences Research Council.
Input: -
Output: -
Contact: hlfsimko@liverpool.ac.uk, drigden@liverpool.ac.uk
Collection: -
Maturity: Emerging
Publications
- ConKit: a python interface to contact predictions.
- Simkovic F, et al. ConKit: a python interface to contact predictions. ConKit: a python interface to contact predictions. 2017; 33:2209-2211. doi: 10.1093/bioinformatics/btx148
- https://doi.org/10.1093/bioinformatics/btx148
- PMID: 28369168
- PMC: PMC5870551
Download and documentation
Source: https://github.com/rigdenlab/conkit/releases/tag/0.13.3
Documentation: https://www.conkit.org/en/0.9/contents.html
Home page: http://www.conkit.org/en/0.9/
Links: https://youtu.be/YhHkfa7ggAE
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