CyAnimator

CyAnimator is a tool to animate Cytoscape networks. The CyAnimator can animate changes in location, zoom, node color, node size, edge thickness, annotations, cross-fading between any two states and allows the saving of the animations asGIFs and H.264/MP4 movies.

Topic

Molecular interactions, pathways and networks;Data visualisation

Detail

  • Operation: Pathway or network visualisation

  • Software interface: Library

  • Language: Java

  • License: GNU General Public License v3

  • Cost: Free

  • Version name: F1000 Release

  • Credit: NRNB Academy.

  • Input: -

  • Output: -

  • Contact: scooter@cgl.ucsf.edu, Cedric Notredame cedric.notredame@europe.com

  • Collection: -

  • Maturity: Mature

Publications

  • CyAnimator: Simple Animations of Cytoscape Networks.
  • Morris JH, Vijay D, Federowicz S, Pico AR, Ferrin TE. CyAnimator: Simple Animations of Cytoscape Networks. F1000Res. 2015 Aug 5;4:482. doi: 10.12688/f1000research.6852.2. PMID: 26937268; PMCID: PMC4752027.
  • https://doi.org/10.12688/f1000research.6852.2
  • PMID: 26937268
  • PMC: PMC4752027

Download and documentation


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