DIALIGN-TX

DIALIGN-TX is the latest version of the DIALIGN multiple sequence alignment (MSA) tool. The main algorithmic addition is the usage of a guide tree.

Topic

Phylogeny;Sequence analysis;Nucleic acid sites, features and motifs;Nucleic acid structure analysis;Sequence sites, features and motifs

Detail

  • Operation: Multiple alignment;Alignment;Sequence alignment;Multiple sequence alignment

  • Software interface: Web user interface;command-line user interface

  • Language: C

  • License: GNU Lesser General Public License v2

  • Cost: Free

  • Version name: 1.0.2

  • Credit: -

  • Input: FASTA

  • Output: DIALIGN;FASTA

  • Contact: subraman@informatik.uni-tuebingen.de

  • Collection: DIALIGN

  • Maturity: Mature

Publications

  • DIALIGN-T: an improved algorithm for segment-based multiple sequence alignment.
  • Subramanian AR, et al. DIALIGN-T: an improved algorithm for segment-based multiple sequence alignment. DIALIGN-T: an improved algorithm for segment-based multiple sequence alignment. 2005; 6:66. doi: 10.1186/1471-2105-6-66
  • https://doi.org/10.1186/1471-2105-6-66
  • PMID: 15784139
  • PMC: PMC1087830
  • DIALIGN-TX: greedy and progressive approaches for segment-based multiple sequence alignment
  • Subramanian AR, et al. DIALIGN-TX: greedy and progressive approaches for segment-based multiple sequence alignment. DIALIGN-TX: greedy and progressive approaches for segment-based multiple sequence alignment. 2008; 3:6. doi: 10.1186/1748-7188-3-6
  • https://doi.org/10.1186/1748-7188-3-6
  • PMID: 18505568
  • PMC: PMC2430965

Download and documentation

< Back to DB search