DNAPlotter
DNAPlotter is a Java-based software tool that generates circular and linear representations of genomes. It allows users to load sequence files and data from relational databases and filter features of interest to display on separate user-defined tracks. It is easy to use and can produce publication-quality images for papers or web pages.
Topic
DNA
Detail
Operation: Visualisation;Genome visualisation
Software interface: Graphical user interface
Language: Java
License: GNU General Public License, Version 3
Cost: Free
Version name: v18.2.0
Credit: Wellcome Trust Sanger Institute, CB10 1SA and 2European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK
Input: -
Output: -
Contact: artemis@sanger.ac.uk
Collection: -
Maturity: Mature
Publications
- DNAPlotter: circular and linear interactive genome visualization.
- Carver T, et al. DNAPlotter: circular and linear interactive genome visualization. DNAPlotter: circular and linear interactive genome visualization. 2009; 25:119-20. doi: 10.1093/bioinformatics/btn578
- https://doi.org/10.1093/bioinformatics/btn578
- PMID: 18990721
- PMC: PMC2612626
Download and documentation
Source: https://github.com/sanger-pathogens/Artemis/releases/tag/v18.2.0
Documentation: https://github.com/sanger-pathogens/Artemis/#readme
Links: http://sanger-pathogens.github.io/Artemis/DNAPlotter/
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