DeCoaD

DeCoaD is a web-based resource to differentiate correlations among diseases using protein interaction network data. The DeCoaD algorithm uses a random walk to model the information flow in a network where nodes are alternatively proteins. These links represent protein-protein interactions and disease-protein associations.

Topic

Molecular interactions, pathways and networks;Protein interactions;Pathology;Pharmacogenomics

Detail

  • Operation: Correlation;Protein interaction network analysis

  • Software interface: Web user interface

  • Language: Python

  • License: Public Domain

  • Cost: Free

  • Version name: -

  • Credit: The Intramural Research Program of the National Library of Medicine at the National Institutes of Health.

  • Input: -

  • Output: -

  • Contact: Mehdi B Hamaneh bagherih@ncbi.nlm.nih.gov

  • Collection: -

  • Maturity: Mature

Publications

  • DeCoaD: determining correlations among diseases using protein interaction networks.
  • Hamaneh MB, Yu YK. DeCoaD: determining correlations among diseases using protein interaction networks. BMC Res Notes. 2015 Jun 6;8:226. doi: 10.1186/s13104-015-1211-z. PMID: 26047952; PMCID: PMC4467632.
  • https://doi.org/10.1186/s13104-015-1211-z
  • PMID: 26047952
  • PMC: PMC4467632

Download and documentation

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