Easyfig

Easyfig is a software tool to create figures to compare multiple genomic loci linearly. Easyfig produces publication-ready figures and allows visualization of single genes and whole prokaryote chromosomes. The user can interactively color these figures.

Topic

Comparative genomics

Detail

  • Operation: Sequence cluster visualisation

  • Software interface: Graphical user interface

  • Language: Python

  • License: GPL

  • Cost: Free

  • Version name: 2.2.2-5

  • Credit: National Health and Medical Research Council of Australia, Australian Research Council Australian Research Fellowship.

  • Input: gbk

  • Output: -

  • Contact: Mitchell J. Sullivan mjsull@gmail.com, Scott A. Beatson s.beatson@uq.edu.au

  • Collection: -

  • Maturity: Stable

Publications

  • Easyfig: a genome comparison visualizer.
  • Sullivan MJ, Petty NK, Beatson SA. Easyfig: a genome comparison visualizer. Bioinformatics. 2011 Apr 1;27(7):1009-10. doi: 10.1093/bioinformatics/btr039. Epub 2011 Jan 28. PMID: 21278367; PMCID: PMC3065679.
  • https://doi.org/10.1093/bioinformatics/btr039
  • PMID: 21278367
  • PMC: PMC3065679

Download and documentation

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