GCTA

Genome-wide complex trait analysis. GCTA estimates the variance explained by all the SNPs on a sequence for a complex trait, instead of testing associations of each individual SNP.

Topic

Biology, Genetics, Molecular genetics, Genetic variation, DNA polymorphism

Detail

  • Operation: Analysis, Genotyping

  • Software interface: Command-line interface

  • Language: C++

  • License: GNU GPL

  • Cost: -

  • Version name: src: 1.92.0beta3, Linux, Windows, Mac OS X: 1.92.0beta3

  • Credit: Jian Yang, Peter Visscher, Mike Goddard, Hong Lee, Zhili Zheng, Zhihong Zhu, Jian Zeng, Andrew Bakshi, Robert Maier.

  • Input: -

  • Output: -

  • Contact: -

  • Collection: -

  • Maturity: -

Publications

  • Genome-wide complex trait analysis (GCTA): methods, data analyses, and interpretations.
  • Yang J, et al. Genome-wide complex trait analysis (GCTA): methods, data analyses, and interpretations. Genome-wide complex trait analysis (GCTA): methods, data analyses, and interpretations. 2013; 1019:215-36. doi: 10.1007/978-1-62703-447-0_9
  • https://doi.org/10.1007/978-1-62703-447-0_9
  • PMID: 23756893
  • PMC: -

Download and documentation

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