HiTEC

HiTEC is a software tool that corrects sequencing errors in high-throughput sequencing data, which produces large amounts of data. HiTEC is fully automated, robust, and accurate compared to previous error-correction methods. It is efficient in terms of time and space and works well for all read lengths, genome sizes, and coverage levels.

Topic

Sequencing;Data quality management;Workflows

Detail

  • Operation: Sequencing quality control;Optimisation and refinement;Sequencing error detection

  • Software interface: Command-line user interface

  • Language: C++

  • License: -

  • Cost: Free

  • Version name: -

  • Credit: Natural Sciences and Engineering Research Council of Canada (NSERC)

  • Input: -

  • Output: -

  • Contact: ilie@uwo.ca

  • Collection: -

  • Maturity: -

Publications

  • HiTEC: accurate error correction in high-throughput sequencing data.
  • Ilie L, et al. HiTEC: accurate error correction in high-throughput sequencing data. HiTEC: accurate error correction in high-throughput sequencing data. 2011; 27:295-302. doi: 10.1093/bioinformatics/btq653
  • https://doi.org/10.1093/bioinformatics/btq653
  • PMID: 21115437
  • PMC: -

Download and documentation

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