HmtDB

HmtDB is a human mitochondrial genome pathogenicity-specific mtDNA mutations database resource to support clinicians and population geneticists.

Topic

DNA

Detail

  • Operation: Sequence database search

  • Software interface: Database portal

  • Language: -

  • License: -

  • Cost: Free

  • Version name: -

  • Credit: FP7 ITN-People Marie Curie Action grant, the Italian Association for Cancer Research (AIRC), Italian Ministry of Health, Worldwide Cancer Research UK grant DHOMOS.

  • Input: -

  • Output: -

  • Contact: hmtdb.update@uniba.it, Marcella Attimonelli m.attimonelli@biologia.uniba.it, Matteo Accetturo m.accetturo@biologia.uniba.it, Monica Santamaria monicasantamariait@yahoo.it, Daniela Lascaro daniela.lascaro@biologia.uniba.it, Gaetano Scioscia g_scioscia@it.ibm.com, Graziano Pappadà graziano_p@yahoo.it, Luigi Russo luigidamiano_russo@yahoo.it, Luigi Zanchetta gigizanc@tin.it, Mila Tommaseo-Ponzetta m.tommaseo@biologia.uniba.it

  • Collection: -

  • Maturity: -

Publications

  • HmtDB, a genomic resource for mitochondrion-based human variability studies
  • Rubino F, Piredda R, Calabrese FM, Simone D, Lang M, Calabrese C, Petruzzella V, Tommaseo-Ponzetta M, Gasparre G, Attimonelli M. HmtDB, a genomic resource for mitochondrion-based human variability studies. Nucleic Acids Res. 2012 Jan;40(Database issue):D1150-9. doi: 10.1093/nar/gkr1086. Epub 2011 Dec 1. PMID: 22139932; PMCID: PMC3245114.
  • https://doi.org/10.1093/nar/gkr1086
  • PMID: 22139932
  • PMC: PMC3245114
  • HmtDB 2016: data update, a better performing query system and human mitochondrial DNA haplogroup predictor.
  • Clima R, et al. HmtDB 2016: data update, a better performing query system and human mitochondrial DNA haplogroup predictor. HmtDB 2016: data update, a better performing query system and human mitochondrial DNA haplogroup predictor. 2017; 45:D698-D706. doi: 10.1093/nar/gkw1066
  • https://doi.org/10.1093/nar/gkw1066
  • PMID: 27899581
  • PMC: PMC5210550
  • HmtDB, a human mitochondrial genomic resource based on variability studies supporting population genetics and biomedical research
  • Attimonelli M, Accetturo M, Santamaria M, Lascaro D, Scioscia G, Pappadà G, Russo L, Zanchetta L, Tommaseo-Ponzetta M. HmtDB, a human mitochondrial genomic resource based on variability studies supporting population genetics and biomedical research. BMC Bioinformatics. 2005 Dec 1;6 Suppl 4(Suppl 4):S4. doi: 10.1186/1471-2105-6-S4-S4. PMID: 16351753; PMCID: PMC1866381.
  • https://doi.org/10.1186/1471-2105-6-S4-S4
  • PMID: 16351753
  • PMC: PMC1866381

Download and documentation

    Currently not available or not maintained.

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