IMPre

IMPre (Immune Germline Prediction) is a tool to predict variable, joining genes and alleles from the sequenced T-cell receptor and B-cell germline data sets.

Topic

Immunology;Immunoproteins, genes and antigens;Population genetics

Detail

  • Operation: Sequence analysis

  • Software interface: Command-line user interface

  • Language: Perl, C

  • License: GNU General Public License v3

  • Cost: Free

  • Version name: 1.1.0

  • Credit: The Beijing Genomics Institute.

  • Input: -

  • Output: -

  • Contact: Xiao Liu liuxiao@genomics.cn

  • Collection: -

  • Maturity: -

Publications

  • IMPre: An Accurate and Efficient Software for Prediction of T- and B-Cell Receptor Germline Genes and Alleles from Rearranged Repertoire Data.
  • Zhang W, Wang IM, Wang C, Lin L, Chai X, Wu J, Bett AJ, Dhanasekaran G, Casimiro DR, Liu X. IMPre: An Accurate and Efficient Software for Prediction of T- and B-Cell Receptor Germline Genes and Alleles from Rearranged Repertoire Data. Front Immunol. 2016 Nov 4;7:457. doi: 10.3389/fimmu.2016.00457. PMID: 27867380; PMCID: PMC5095119.
  • https://doi.org/10.3389/fimmu.2016.00457
  • PMID: 27867380
  • PMC: PMC5095119

Download and documentation

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