ImageJ

ImageJ is a OPen Source Java tool to process and analyze biomedical images. Various Open Source plugins and extensions are available.

Topic

Imaging

Detail

  • Operation: Image analysis;Processing;Analysis

  • Software interface: Graphical user interface

  • Language: Java

  • License: Public domain

  • Cost: Free

  • Version name: 1.53s

  • Credit: Chan Zuckerberg Initiative, Deutsche Forschungsgemeinschaft, European Regional Development Fund, German Federal Ministry of Research and Education, Morgridge Institute for Research, National Institute of General Medical Sciences, Retina Research Foundation Walter H. Helmerich Professorship.

  • Input: TIFF, GIF, JPEG, BMP, PNG, PGM, FITS, ASCII, DICOM

  • Output: TIFF, GIF, JPEG, BMP, PNG, PGM, FITS, ASCII, DICOM

  • Contact: Kevin W. Eliceiri eliceiri@wisc.edu

  • Collection: -

  • Maturity: Mature

Publications

  • The ImageJ ecosystem: An open platform for biomedical image analysis
  • Schindelin J, Rueden CT, Hiner MC, Eliceiri KW. The ImageJ ecosystem: An open platform for biomedical image analysis. Mol Reprod Dev. 2015 Jul-Aug;82(7-8):518-29. doi: 10.1002/mrd.22489. Epub 2015 Jul 7. PMID: 26153368; PMCID: PMC5428984.
  • https://doi.org/10.1002/mrd.22489
  • PMID: 26153368
  • PMC: PMC5428984
  • The ImageJ ecosystem: Open-source software for image visualization, processing, and analysis
  • Schroeder AB, Dobson ETA, Rueden CT, Tomancak P, Jug F, Eliceiri KW. The ImageJ ecosystem: Open-source software for image visualization, processing, and analysis. Protein Sci. 2021 Jan;30(1):234-249. doi: 10.1002/pro.3993. Epub 2020 Nov 20. PMID: 33166005; PMCID: PMC7737784.
  • https://doi.org/10.1002/pro.3993
  • PMID: 33166005
  • PMC: PMC7737784
  • NIH Image to ImageJ: 25 years of image analysis.
  • Schneider CA, Rasband WS, Eliceiri KW. NIH Image to ImageJ: 25 years of image analysis. Nat Methods. 2012 Jul;9(7):671-5. doi: 10.1038/nmeth.2089. PMID: 22930834; PMCID: PMC5554542.
  • https://doi.org/10.1038/nmeth.2089
  • PMID: 22930834
  • PMC: PMC5554542

Download and documentation

< Back to DB search