ImmQuant

ImmQuant is an intuitive software tool for non-bioinformatician researchers to analyze hundreds of mouse immune cell subsets and dozens of human cell types with the DCQ deconvolution algorithm.

Topic

Immunology;Light microscopy;Transcriptomics

Detail

  • Operation: Sequence analysis

  • Software interface: Graphical user interface

  • Language: R;Java

  • License: Other

  • Cost: Free

  • Version name: -

  • Credit: The European Research Counciland the Edmond J. Safra Center for Bioinformatics at Tel-Aviv University.

  • Input: -

  • Output: -

  • Contact: iritgv@post.tau.ac.il

  • Collection: -

  • Maturity: -

Publications

  • ImmQuant: a user-friendly tool for inferring immune cell-type composition from gene-expression data.
  • Frishberg A, et al. ImmQuant: a user-friendly tool for inferring immune cell-type composition from gene-expression data. ImmQuant: a user-friendly tool for inferring immune cell-type composition from gene-expression data. 2016; 32:3842-3843. doi: 10.1093/bioinformatics/btw535
  • https://doi.org/10.1093/bioinformatics/btw535
  • PMID: 27531105
  • PMC: PMC5167062

Download and documentation

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