KEGGtranslator

KEGGtranslator is a standalone application that converts the proprietary XML-format KGML files of the KEGG PATHWAY database into various output formats. It supports a wide range of output formats, can augment information beyond the scope of the KGML document, and amends missing components to allow simulations on fragmentary reactions within the pathway.

Topic

Gene expression;Data management

Detail

  • Operation: Formatting

  • Software interface: Graphical user interface

  • Language: Java

  • License: GNU Lesser General Public License

  • Cost: Free

  • Version name: 2.5

  • Credit: The Federal Ministry of Education and Research (BMBF, Germany).

  • Input: -

  • Output: -

  • Contact: Clemens Wrzodek clemens.wrzodek@uni-tuebingen.de

  • Collection: -

  • Maturity: -

Publications

  • KEGGtranslator: visualizing and converting the KEGG PATHWAY database to various formats.
  • Wrzodek C, et al. KEGGtranslator: visualizing and converting the KEGG PATHWAY database to various formats. KEGGtranslator: visualizing and converting the KEGG PATHWAY database to various formats. 2011; 27:2314-5. doi: 10.1093/bioinformatics/btr377
  • https://doi.org/10.1093/bioinformatics/btr377
  • PMID: 21700675
  • PMC: PMC3150042

Download and documentation

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