LAST
LAST is a software tool to align short reads. The LAST algorithm uses quality values to improve the accuracy of the sequence alignments.
Topic
Genomics;Comparative genomics
Detail
Operation: Sequence alignment
Software interface: Web service
Language: C++
License: GNU General Public License v3
Cost: Free
Version name: -
Credit: INTEC Systems Institute, Inc., Japanese Ministry of Education, Culture, Sport, Science and Technology, AIST internal budget.
Input: -
Output: -
Contact: last-align@googlegroups.com
Collection: -
Maturity: -
Publications
- Incorporating sequence quality data into alignment improves DNA read mapping.
- Frith MC, Wan R, Horton P. Incorporating sequence quality data into alignment improves DNA read mapping. Nucleic Acids Res. 2010 Apr;38(7):e100. doi: 10.1093/nar/gkq010. Epub 2010 Jan 27. PMID: 20110255; PMCID: PMC2853142.
- https://doi.org/10.1093/nar/gkq010
- PMID: 20110255
- PMC: PMC2853142
Download and documentation
Source: https://github.com/lpryszcz/last
Documentation: https://github.com/lpryszcz/last/tree/master/doc
Home page: http://last.cbrc.jp/
< Back to DB search