LDlink
A suite of web applications to assess haplotype structures and linkage of funtional variants.
Topic
Genetics, Population genetics, Whole genome sequencing
Detail
Operation: Linkage disequilibrium calculation
Software interface: Web user interface
Language: -
License: -
Cost: Free
Version name: 3.5
Credit: Machiela MJ, Chanock SJ.
Input: -
Output: -
Contact: NCILDlinkWebAdmin at mail.nih.gov
Collection: -
Maturity: Stable
Publications
- LDlink: a web-based application for exploring population-specific haplotype structure and linking correlated alleles of possible functional variants.
- Machiela MJ and Chanock SJ. LDlink: a web-based application for exploring population-specific haplotype structure and linking correlated alleles of possible functional variants. LDlink: a web-based application for exploring population-specific haplotype structure and linking correlated alleles of possible functional variants. 2015; 31:3555-7. doi: 10.1093/bioinformatics/btv402
- https://doi.org/10.1093/bioinformatics/btv402
- PMID: 26139635
- PMC: PMC4626747
- LDassoc: an online tool for interactively exploring genome-wide association study results and prioritizing variants for functional investigation.
- Machiela MJ and Chanock SJ. LDassoc: an online tool for interactively exploring genome-wide association study results and prioritizing variants for functional investigation. LDassoc: an online tool for interactively exploring genome-wide association study results and prioritizing variants for functional investigation. 2018; 34:887-889. doi: 10.1093/bioinformatics/btx561
- https://doi.org/10.1093/bioinformatics/btx561
- PMID: 28968746
- PMC: PMC6030966
Download and documentation
Documentation: https://ldlink.nci.nih.gov/#help-tab
Home page: https://ldlink.nci.nih.gov/
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