MAGNA++

MAGNA++ is a network alignment software that aims to find conserved regions between different networks. It extends the original MAGNA framework with several algorithmic advances, including the ability to simultaneously maximize edge conservation measures and any desired node conservation measure. It also provides a friendly graphical user interface for easy use by domain scientists and offers source code for easy extensibility by computational scientists.

Topic

Molecular interactions, pathways and networks;Evolutionary biology

Detail

  • Operation: Optimisation and refinement

  • Software interface: Graphical user interface

  • Language: C++

  • License: Other

  • Cost: Free for academic use

  • Version name: -

  • Credit: National Science Foundation

  • Input: -

  • Output: -

  • Contact: tmilenko@nd.edu;vvijayan@nd.edu

  • Collection: -

  • Maturity: -

Publications

  • MAGNA++: Maximizing Accuracy in Global Network Alignment via both node and edge conservation.
  • Vijayan V, et al. MAGNA++: Maximizing Accuracy in Global Network Alignment via both node and edge conservation. MAGNA++: Maximizing Accuracy in Global Network Alignment via both node and edge conservation. 2015; 31:2409-11. doi: 10.1093/bioinformatics/btv161
  • https://doi.org/10.1093/bioinformatics/btv161
  • PMID: 25792552
  • PMC: -

Download and documentation

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