MGAviewer

MGAviewer is a web-based desktop application for visualizing metagenomic sequence alignment data. It is designed to handle interspecies alignment data, which current genome browsers are not suitable for. The tool is easy to use on all computer systems with modern web browsers and requires no software installation.

Topic

visualization, metagenomics, alignment, sequencing data, web browser-based application

Detail

  • Operation: visualization

  • Software interface: -

  • Language: -

  • License: -

  • Cost: Free

  • Version name: -

  • Credit: The National Human Genome Research Institute, the Gordon and Betty Moore Foundation.

  • Input: -

  • Output: -

  • Contact: Weizhong Li liwz@sdsc.edu

  • Collection: -

  • Maturity: -

Publications

  • MGAviewer: a desktop visualization tool for analysis of metagenomics alignment data.
  • Zhu Z, et al. MGAviewer: a desktop visualization tool for analysis of metagenomics alignment data. MGAviewer: a desktop visualization tool for analysis of metagenomics alignment data. 2013; 29:122-3. doi: 10.1093/bioinformatics/bts567
  • https://doi.org/10.1093/bioinformatics/bts567
  • PMID: 23044549
  • PMC: PMC3530914

Download and documentation

    Currently not available or not maintained.

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