MUGBAS

MUGBAS (MUlti species Gene-Based Association Suite) is introduced as a fast, highly parallelized and species and annotation independent tool for estimating the P-value of a gene using information on annotation, single marker GWA results and genotype. It is designed to work for high-density marker studies.

Topic

Genetics;GWAS study;Genotype and phenotype

Detail

  • Operation: Analysis

  • Software interface: Suite

  • Language: R;Python

  • License: GNU General Public License

  • Cost: Free

  • Version name: 1.0

  • Credit: Doctoral School on the Agro-Food System (Agrisystem) of the Università Cattolica del Sacro Cuore (Italy).

  • Input: -

  • Output: -

  • Contact: capemaster@gmail.com

  • Collection: -

  • Maturity: -

Publications

  • MUGBAS: a species free gene-based programme suite for post-GWAS analysis.
  • Capomaccio S, et al. MUGBAS: a species free gene-based programme suite for post-GWAS analysis. MUGBAS: a species free gene-based programme suite for post-GWAS analysis. 2015; 31:2380-1. doi: 10.1093/bioinformatics/btv144
  • https://doi.org/10.1093/bioinformatics/btv144
  • PMID: 25765345
  • PMC: -

Download and documentation

< Back to DB search