MultiDataSet
The software tool "MultiDataSet" addresses managing multiple omic datasets from the same subjects, a common scenario in current biomedical studies with cost-efficient genomic assays. In response to the absence of a standard class for this purpose in Bioconductor, the tool introduces a new R class adhering to Bioconductor standards. "MultiDataSet" is designed to encapsulate and handle various omic datasets, effectively managing the complexities of incomplete data sets. It provides a straightforward and general approach for subsetting features and selecting samples.
Topic
Omics;DNA;Epigenetics
Detail
Operation: Methylation analysis
Software interface: Command-line user interface,Library
Language: R
License: -
Cost: Free
Version name: 1.30.0
Credit: The Spanish Ministry of Economy and Competitiveness ,European Community’s Seventh Framework Programme – the HELIX project, Catalan Government.
Input: -
Output: -
Contact: Xavier Escribc3a0 Montagut xavier.escriba@isglobal.org
Collection: -
Maturity: Stable
Publications
- MultiDataSet: an R package for encapsulating multiple data sets with application to omic data integration.
- Hernandez-Ferrer C, et al. MultiDataSet: an R package for encapsulating multiple data sets with application to omic data integration. MultiDataSet: an R package for encapsulating multiple data sets with application to omic data integration. 2017; 18:36. doi: 10.1186/s12859-016-1455-1
- https://doi.org/10.1186/s12859-016-1455-1
- PMID: 28095799
- PMC: PMC5240259
Download and documentation
Source: http://bioconductor.org/packages/release/bioc/src/contrib/MultiDataSet_1.30.0.tar.gz
Documentation: http://bioconductor.org/packages/release/bioc/manuals/MultiDataSet/man/MultiDataSet.pdf
Home page: http://bioconductor.org/packages/release/bioc/html/MultiDataSet.html
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