MultiDataSet

The software tool "MultiDataSet" addresses managing multiple omic datasets from the same subjects, a common scenario in current biomedical studies with cost-efficient genomic assays. In response to the absence of a standard class for this purpose in Bioconductor, the tool introduces a new R class adhering to Bioconductor standards. "MultiDataSet" is designed to encapsulate and handle various omic datasets, effectively managing the complexities of incomplete data sets. It provides a straightforward and general approach for subsetting features and selecting samples.

Topic

Omics;DNA;Epigenetics

Detail

  • Operation: Methylation analysis

  • Software interface: Command-line user interface,Library

  • Language: R

  • License: -

  • Cost: Free

  • Version name: 1.30.0

  • Credit: The Spanish Ministry of Economy and Competitiveness ,European Community’s Seventh Framework Programme – the HELIX project, Catalan Government.

  • Input: -

  • Output: -

  • Contact: Xavier Escribc3a0 Montagut xavier.escriba@isglobal.org

  • Collection: -

  • Maturity: Stable

Publications

  • MultiDataSet: an R package for encapsulating multiple data sets with application to omic data integration.
  • Hernandez-Ferrer C, et al. MultiDataSet: an R package for encapsulating multiple data sets with application to omic data integration. MultiDataSet: an R package for encapsulating multiple data sets with application to omic data integration. 2017; 18:36. doi: 10.1186/s12859-016-1455-1
  • https://doi.org/10.1186/s12859-016-1455-1
  • PMID: 28095799
  • PMC: PMC5240259

Download and documentation


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