NAP_(The_Network_Analysis_Profiler)

NAP (Network Analysis Provider) is a web-based tool for automated profiling and comparing network topologies. The NAP algorithm includes topological feature extraction functions, ranking, comparison between networks, and plotting.

Topic

Molecular interactions, pathways and networks

Detail

  • Operation: Pathway or network analysis;Network simulation; Visualization

  • Software interface: Web user interface

  • Language: R, Shiny

  • License: -

  • Cost: Free

  • Version name: v2.0

  • Credit: The US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility.

  • Input: -

  • Output: -

  • Contact: Theodosios Theodosiou theodosios.theodosiou@gmail.com

  • Collection: -

  • Maturity: Stable

Publications

  • NAP: The Network Analysis Profiler, a web tool for easier topological analysis and comparison of medium-scale biological networks
  • Theodosiou T, Efstathiou G, Papanikolaou N, Kyrpides NC, Bagos PG, Iliopoulos I, Pavlopoulos GA. NAP: The Network Analysis Profiler, a web tool for easier topological analysis and comparison of medium-scale biological networks. BMC Res Notes. 2017 Jul 14;10(1):278. doi: 10.1186/s13104-017-2607-8. PMID: 28705239; PMCID: PMC5513407.
  • https://doi.org/10.1186/s13104-017-2607-8
  • PMID: 28705239
  • PMC: PMC5513407
  • The Network Analysis Profiler (NAP V2.0): A Web Tool For Visual Topological Comparison Between Multiple Networks
  • Kaushik A, et al. miRMOD: a tool for identification and analysis of 5' and 3' miRNA modifications in Next Generation Sequencing small RNA data. miRMOD: a tool for identification and analysis of 5' and 3' miRNA modifications in Next Generation Sequencing small RNA data. 2015; 3:e1332. doi: 10.7717/peerj.1332
  • https://doi.org/https://doi.org/10.14806/ej.26.1.943
  • PMID: -
  • PMC: -

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