OCSANA

OCSANA (optimal combinations of interventions from network analysis) is a software that identifies and prioritizes optimal and minimal combinations of interventions to disrupt the paths between source nodes and target nodes in a signaling network. It aims to minimize side-effects on specified off-target nodes while coping with very large networks. OCSANA is implemented as a plugin for Cytoscape.

Topic

Systems biology

Detail

  • Operation: Network analysis;Analysis

  • Software interface: Graphical user interface

  • Language: Java

  • License: GNU Lesser General Public License v3

  • Cost: Free

  • Version name: -

  • Credit: ASSET EU FP7 collaborative project, ‘Project Incitatif et Collaboratif Computational Systems Biology Approach for Cancer' from Institut Curie.

  • Input: -

  • Output: -

  • Contact: Paola Vera-Licona paola.vera-licona@curie.fr

  • Collection: -

  • Maturity: -

Publications

  • OCSANA: optimal combinations of interventions from network analysis.
  • Vera-Licona P, et al. OCSANA: optimal combinations of interventions from network analysis. OCSANA: optimal combinations of interventions from network analysis. 2013; 29:1571-3. doi: 10.1093/bioinformatics/btt195
  • https://doi.org/10.1093/bioinformatics/btt195
  • PMID: 23626000
  • PMC: -

Download and documentation

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