OLINgui

The software tool OLIN is an R package that provides two normalization schemes for microarray data. These schemes use iterative local regression combined with model selection to adjust normalization procedures to the underlying data structure, resulting in improved quality of normalization. OLIN also includes functions for visualization and detection of systematic errors in microarray data and has a graphical user interface.

Topic

Microarray experiment;Gene expression

Detail

Operation: Standardisation and normalisation
Software interface: Command-line user interface;Library
Language: R
License: GNU General Public License v2
Cost: Free
Version name: 1.72.0
Credit: PhD scholarship from the University of Otago.
Input: -
Output: -
Contact: Matthias Futschik mfutschik@ualg.pt
Collection: -
Maturity: Stable

Publications

Download and documentation

Source: http://bioconductor.org/packages/release/bioc/src/contrib/OLINgui_1.72.0.tar.gz
Documentation: http://bioconductor.org/packages/release/bioc/manuals/OLINgui/man/OLINgui.pdf
Home page: http://bioconductor.org/packages/release/bioc/html/OLINgui.html
Links: http://bioconductor.org/packages/release/bioc/vignettes/OLINgui/inst/doc/OLINgui.pdf

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