PDV

PDV is a proteomics data viewer used to visualize various types of proteomics data, including database search results, de novo sequencing results, proteogenomics files, MS/MS data, and data from public proteomics repositories. It is a lightweight tool that enables intuitive and fast exploration of diverse, large-scale proteomics datasets on standard desktop computers in both graphical user interface and command line modes.

Topic

proteomics data visualization

Detail

  • Operation: Data visualization; Data exploration; Data management; Data analysis; Data import; Data export; MS/MS data visualization; Proteomics data visualization; Data quality control; Peptide identification validation; Database search result visualization; De novo sequencing result visualization; Proteogenomics file visualization; Public proteomics repository data visualization

  • Software interface: -

  • Language: -

  • License: GNU General Public Licence v3

  • Cost: Free

  • Version name: -

  • Credit: National Cancer Institute Clinical Proteomic Tumor Analysis Consortium (CPTAC), by grant CPRIT from the Cancer Prevention and Research Institutes of Texas, by funding from the McNair Medical Institute at The Robert and Janice McNair Foundation and by funding from the National Key R&D Program of China.

  • Input: -

  • Output: -

  • Contact: reny@genomics.cn, bo.wen@bcm.edu

  • Collection: -

  • Maturity: Stable

Publications

Download and documentation

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