PIANA

The software tool PIANA provides a framework for working with protein interaction networks, which integrates data from multiple sources, provides a library for handling graph-related tasks, and automates the analysis of protein-protein interaction networks. PIANA can also be used as a stand-alone application to create protein interaction networks and perform tasks such as predicting protein interactions and helping to identify spots in a 2D electrophoresis gel.

Topic

Systems biology

Detail

  • Operation: Pathway or network analysis

  • Software interface: Web user interface

  • Language: Python

  • License: GNU General Public License, version 3

  • Cost: Free

  • Version name: 1.47

  • Credit: Spanish Ministerio de Ciencia y Tecnología, Fundación Ramón Areces, from the Spanish Ministerio de Educación y Ciencia, the ‘Programa Gaspar de Portolà (DURSI)’, and by EU grant INFOBIOMED-NoE.

  • Input: -

  • Output: -

  • Contact: baldo.oliva@upf.edu

  • Collection: -

  • Maturity: -

Publications

  • PIANA: protein interactions and network analysis.
  • Aragues R, et al. PIANA: protein interactions and network analysis. PIANA: protein interactions and network analysis. 2006; 22:1015-7. doi: 10.1093/bioinformatics/btl072
  • https://doi.org/10.1093/bioinformatics/btl072
  • PMID: 16510498
  • PMC: -

Download and documentation

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