PSAR-align

A tool for improving multiple sequence alignments using probabilistic sampling.

Topic

Phylogeny;Sequence analysis;Nucleic acid sites, features and motifs;Nucleic acid structure analysis;Sequence sites, features and motifs

Detail

  • Operation: Multiple sequence alignment

  • Software interface: Command-line user interface

  • Language: C++

  • License: -

  • Cost: Free

  • Version name: -

  • Credit: National Research Foundation of Korea Grant (2012R1A1A1015186 to J.K.) and National Institutes of Health grant (HG006464 to J.M.).

  • Input: -

  • Output: -

  • Contact: jbkim@konkuk.ac.kr | jianma@illinois.edu

  • Collection: -

  • Maturity: -

Publications

  • PSAR-align: improving multiple sequence alignment using probabilistic sampling.
  • Kim J and Ma J. PSAR-align: improving multiple sequence alignment using probabilistic sampling. PSAR-align: improving multiple sequence alignment using probabilistic sampling. 2014; 30:1010-2. doi: 10.1093/bioinformatics/btt636
  • https://doi.org/10.1093/bioinformatics/btt636
  • PMID: 24222208
  • PMC: -

Download and documentation

    Currently not available or not maintained.


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